Bourassa, François XP, Paul François, Gautam Reddy, and Massimo Vergassola. 2025. “Manifold Learning for Olfactory Habituation to Strongly Fluctuating Backgrounds”. BioRxiv. Cold Spring Harbor Laboratory, 2025–05.

George, Abir, V, Ned S Wingreen, and Gautam Reddy. 2025. “Phenotypic Heterogeneity in Lag Reflects an Evolutionarily Stable Bet-Hedging Strategy”. BioRxiv. Cold Spring Harbor Laboratory, 2025–11.

Hamou, Noé, Samuel J Gershman, and Gautam Reddy. 2025. “Reconciling Time and Prediction Error Theories of Associative Learning”. BioRxiv. Cold Spring Harbor Laboratory, 2025–01.

Ji, Catherine, Ravin Raj, Benjamin Eysenbach, and Gautam Reddy. 2025. “Identifying Nonequilibrium Degrees of Freedom in High-Dimensional Stochastic Systems”. ArXiv Preprint ArXiv:2508.08247.

Reddy, Gautam. 2025. “Dynamic Landscapes and Statistical Limits on Growth During Cell Fate Specification”. Physical Review E 111. American Physical Society: 064418.

Rijal, Krishna, Caroline M Holmes, Samantha Petti, Gautam Reddy, Michael M Desai, and Pankaj Mehta. 2025. “Inferring Genotype-Phenotype Maps Using Attention Models”. ArXiv Preprint ArXiv:2504.10388.

Tong, William L, Venkatesh N Murthy, and Gautam Reddy. 2025. “Adaptive Algorithms for Shaping Behavior”. PLOS Computational Biology 21. Public Library of Science San Francisco, CA USA: e1013454.

Wurgaft, Daniel, Ekdeep Singh Lubana, Core Francisco Park, Hidenori Tanaka, Gautam Reddy, and Noah D Goodman. 2025. “In-Context Learning Strategies Emerge Rationally”. ArXiv Preprint ArXiv:2506.17859.

Celani, Antonio, Gautam Reddy, and Massimo Vergassola. 2024. “Sticky Issues in Turbulent Transport”. In , 25:235–251.

Nguyen, Alex, and Gautam Reddy. 2024. “Differential Learning Kinetics Govern the Transition from Memorization to Generalization During In-Context Learning”. ArXiv, arXiv–2412.

Zak, Joseph D, Gautam Reddy, Vaibhav Konanur, and Venkatesh N Murthy. 2024. “Distinct Information Conveyed to the Olfactory Bulb by Feedforward Input from the Nose and Feedback from the Cortex”. Nature Communications 15. Nature Publishing Group UK London: 3268.

He, Danyun, Gautam Reddy, and Chris H Rycroft. 2023. “Energy-Positive Soaring Using Transient Turbulent Fluctuations”. ArXiv Preprint ArXiv:2304.05983.

Johnson, Milo S, Gautam Reddy, and Michael M Desai. 2023. “Epistasis and Evolution: Recent Advances and an Outlook for Prediction”. BMC Biology 21. Springer: 120.

Petti*, Samantha, Gautam Reddy*, and Michael M Desai. 2023. “Inferring Sparse Structure in Genotype–phenotype Maps”. Genetics 225. Oxford University Press: iyad127.

Reddy, Gautam. 2023. “The Mechanistic Basis of Data Dependence and Abrupt Learning in an In-Context Classification Task”. ArXiv Preprint ArXiv:2312.03002.

Reddy, Gautam, Boris I Shraiman, and Massimo Vergassola. 2022. “Sector Search Strategies for Odor Trail Tracking”. Proceedings of the National Academy of Sciences 119. National Academy of Sciences: e2107431118.

Reddy, Gautam, Laura Desban, Hidenori Tanaka, Julian Roussel, Olivier Mirat, and Claire Wyart. 2022. “A Lexical Approach for Identifying Behavioural Action Sequences”. PLoS Computational Biology 18. Public Library of Science San Francisco, CA USA: e1009672.

Reddy, Gautam. 2022. “A Reinforcement-Based Mechanism for Discontinuous Learning”. Proceedings of the National Academy of Sciences 119. PNAS: e2215352119.

Reddy, Gautam, Venkatesh N Murthy, and Massimo Vergassola. 2022. “Olfactory Sensing and Navigation in Turbulent Environments”. Annual Review of Condensed Matter Physics 13. Annual Reviews: 191–213.

Rigolli*, Nicola, Gautam Reddy*, Agnese Seminara, and Massimo Vergassola. 2022. “Alternation Emerges As a Multi-Modal Strategy for Turbulent Odor Navigation”. Elife 11. eLife Sciences Publications Limited: e76989.

Reddy, Gautam, and Michael M Desai. 2021. “Global Epistasis Emerges from a Generic Model of a Complex Trait”. Elife 10. eLife Sciences Publications Limited: e64740.

Pfister, Patrick, Benjamin C Smith, Barry J Evans, Jessica H Brann, Casey Trimmer, Mushhood Sheikh, Randy Arroyave, et al. 2020. “Odorant Receptor Inhibition Is Fundamental to Odor Encoding”. Current Biology 30. Cell Press: 2574–2587.

Zak, Joseph D, Gautam Reddy, Massimo Vergassola, and Venkatesh N Murthy. 2020. “Antagonistic Odor Interactions in Olfactory Sensory Neurons Are Widespread in Freely Breathing Mice”. Nature Communications 11. Nature Publishing Group UK London: 3350.

Carballo-Pacheco, Martín, Jonathan Desponds, Tatyana Gavrilchenko, Andreas Mayer, Roshan Prizak, Gautam Reddy, Ilya Nemenman, and Thierry Mora. 2019. “Receptor Crosstalk Improves Concentration Sensing of Multiple Ligands”. Physical Review E 99. APS: 022423.

Reddy*, Gautam, Joseph D Zak*, Massimo Vergassola, and Venkatesh N Murthy. 2018. “Antagonism in Olfactory Receptor Neurons and Its Implications for the Perception of Odor Mixtures”. Elife 7. eLife Sciences Publications Limited: e34958.

Reddy*, Gautam, Jerome Wong-Ng*, Antonio Celani, Terrence J Sejnowski, and Massimo Vergassola. 2018. “Glider Soaring via Reinforcement Learning in the Field”. Nature 562. Nature Publishing Group: 236–239.

Ryali, Chaitanya, Gautam Reddy, and Angela J Yu. 2018. “Demystifying Excessively Volatile Human Learning: A Bayesian Persistent Prior and a Neural Approximation”. Advances in Neural Information Processing Systems 31: 2781–2790.

Reddy, Gautam, Antonio Celani, and Massimo Vergassola. 2016. “Infomax Strategies for an Optimal Balance Between Exploration and Exploitation”. Journal of Statistical Physics 163. Springer US New York: 1454–1476.

Reddy, Gautam, Antonio Celani, Terrence J Sejnowski, and Massimo Vergassola. 2016. “Learning to Soar in Turbulent Environments”. Proceedings of the National Academy of Sciences 113. National Acad Sciences: E4877–E4884.